Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC1Leucine-rich repeat-containing protein 1. (482 aa)    
Predicted Functional Partners:
PHLPP1
PH domain and leucine-rich repeat-containing protein phosphatase.
    
   0.772
PAK2
Serine/threonine-protein kinase PAK 2.
    
 0.714
MCC
Colorectal mutant cancer protein isoform X1.
    
 
 0.695
PUF60
Poly(U)-binding-splicing factor PUF60 isoform X1.
   
 
 0.691
PIM3
Proto-oncogene serine/threonine-protein kinase Pim-3.
    
 0.673
VANGL1
Vang-like protein 1.
   
 0.651
VANGL2
Vang-like protein 2.
   
 0.651
BICC1
Protein bicaudal C homolog 1.
      
 0.649
CPEB1
Cytoplasmic polyadenylation element-binding protein 1 isoform X1.
      
 0.632
PPP1CC
Serine/threonine-protein phosphatase PP1-gamma catalytic subunit.
    
 0.625
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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