STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN12Tetraspanin-12 isoform X1. (344 aa)    
Predicted Functional Partners:
NDP
Norrin.
    
 0.905
FZD4
Frizzled class receptor 4.
   
 
 0.857
ZNF408
Zinc finger protein 408 isoform X1.
      
 0.856
RECK
Reversion-inducing cysteine-rich protein with Kazal motifs isoform X1.
      
 0.698
LGR4
Leucine-rich repeat-containing G protein-coupled receptor 4.
     
 0.667
LRP5
Low density lipoprotein receptor-related protein 5/6.
     
 0.642
DOCK6
Dedicator of cytokinesis protein 6 isoform X1.
      
 0.616
DOCK7
Dedicator of cytokinesis protein 7 isoform X1.
      
 0.616
ARHGAP31
Rho GTPase-activating protein 31 isoform X1.
      
 0.580
ARHGAP30
Rho GTPase-activating protein 30 isoform X1.
      
 0.580
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.