STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYDE1Rho GTPase-activating protein SYDE1 isoform X1. (638 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
      
 0.612
GCM1
Chorion-specific transcription factor GCMa.
      
 0.599
ILVBL
Acetolactate synthase-like protein isoform X1.
      
 0.581
GEN1
Flap endonuclease GEN homolog 1.
      
 0.565
PPP4R3A
Serine/threonine-protein phosphatase 4 regulatory subunit 3A isoform X1.
      
 0.534
RHOF
Rho-related GTP-binding protein RhoF isoform X1.
    
 0.528
CDC42
Cell division control protein 42 homolog isoform X1.
    
 0.483
BARX1
Homeobox protein BarH-like 1.
      
 0.479
GPHN
Gephyrin.
      
 0.479
NR6A1
Nuclear receptor subfamily 6 group A member 1 isoform X1.
      
 0.470
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.