STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPED1Cadherin like and PC-esterase domain containing 1. (848 aa)    
Predicted Functional Partners:
FAM3C
Protein FAM3C isoform X1.
      
 0.662
ING3
Inhibitor of growth protein 3 isoform X1.
      
 0.605
FAM210A
Protein FAM210A.
      
 0.570
PDCL2
Phosducin-like protein 2.
      
 0.566
PDCL3
Phosducin-like protein 3.
      
 0.566
EPDR1
Mammalian ependymin-related protein 1.
      
 0.506
WNT16
Wingless-type MMTV integration site family, member 16.
      
 0.482
NELFCD
Negative elongation factor C/D isoform X1.
      
 0.450
STARD3NL
MLN64 N-terminal domain homolog.
      
 0.443
UPB1
Beta-ureidopropionase.
      
 0.437
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.