STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110089248Methyl-CpG-binding domain protein 2. (158 aa)    
Predicted Functional Partners:
RBBP4
Histone-binding protein RBBP4 isoform X1.
   
 0.942
GATAD2B
Transcriptional repressor p66-beta.
   
 0.860
GATAD2A
Transcriptional repressor p66-alpha isoform X1.
   
 0.858
MTA1
Metastasis-associated protein MTA1 isoform X1.
   
 0.857
MTA3
Metastasis-associated protein MTA3.
   
 0.857
MTA2
Metastasis-associated protein MTA2 isoform X1.
   
 0.857
LOC110070984
POU domain, class 5, transcription factor 1-like isoform X1.
    
 
 0.790
KDM1A
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase.
   
 0.779
CHD4
Chromodomain-helicase-DNA-binding protein 4.
    
 0.766
CHD3
Chromodomain helicase DNA binding protein 3.
    
 0.766
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.