STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGLYRP2N-acetylmuramoyl-L-alanine amidase. (502 aa)    
Predicted Functional Partners:
LOC110082605
Cathelicidin antimicrobial peptide.
   
  
 0.648
HSPA4
Heat shock 70 kDa protein 4 isoform X1.
   
  
 0.623
MITD1
MIT domain-containing protein 1 isoform X1.
      
 0.617
TMEM121
Transmembrane protein 121.
      
 0.615
ENSPVIP00000001248
annotation not available
      
 0.521
TXNDC9
Thioredoxin domain-containing protein 9.
     
 0.517
MRPL30
39S ribosomal protein L30, mitochondrial.
      
 0.515
IDS
Iduronate 2-sulfatase isoform X1.
      
 0.514
AKAP17A
Splicing factor, arginine/serine-rich 17.
      
 0.476
LOC110090259
Splicing factor, arginine/serine-rich 17.
      
 0.476
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.