STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPG21Maspardin. (318 aa)    
Predicted Functional Partners:
SPG11
Spatacsin isoform X1.
      
 0.679
TECPR2
Tectonin beta-propeller repeat-containing protein 2 isoform X1.
      
 0.679
SPART
Spartin isoform X1.
      
 0.616
ALDH16A1
Aldehyde dehydrogenase family 16 member A1 isoform X1.
      
 0.611
TNFSF15
Tumor necrosis factor ligand superfamily member 15.
      
 0.602
NIPA1
Magnesium transporter NIPA1.
      
 0.590
SPG7
Paraplegin isoform X1.
      
 0.589
ENSPVIP00000009414
annotation not available
      
 0.584
PAAF1
Proteasomal ATPase-associated factor 1.
      
 0.563
AP5Z1
AP-5 complex subunit zeta-1.
      
 0.558
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.