Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FRMD5FERM domain-containing protein 5 isoform X1. (573 aa)    
Predicted Functional Partners:
FBXO10
F-box only protein 10.
      
 0.621
RASEF
LOW QUALITY PROTEIN: ras and EF-hand domain-containing protein.
      
 0.579
PSAT1
Phosphoserine aminotransferase.
      
 0.569
UBE3A
Ubiquitin-protein ligase E3A isoform X1.
    
 
 0.567
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.476
FN3KRP
Protein-ribulosamine 3-kinase.
      
 0.471
FN3K
Protein-fructosamine 3-kinase.
      
 0.471
RUBCN
Rubicon autophagy regulator.
      
 0.468
ISCA1
Iron-sulfur cluster assembly 1.
      
 0.463
PTPRCAP
Protein tyrosine phosphatase receptor type C-associated protein.
      
 0.463
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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