STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM8A1Family with sequence similarity 8 member A1. (341 aa)    
Predicted Functional Partners:
SEL1L
Protein sel-1 homolog 1.
    
 
 0.946
PITHD1
PITH domain-containing protein 1.
      
 0.852
SEL1L2
Protein sel-1 homolog 2.
    
 
 0.825
SYVN1
E3 ubiquitin-protein ligase synoviolin isoform X1.
    
 
 0.781
AMFR
Autocrine motility factor receptor.
    
 
 0.781
FAM136A
Protein FAM136A.
      
 0.736
FRA10AC1
FRA10A associated CGG repeat 1.
      
 0.732
HERPUD2
HERPUD family member 2.
    
 
 0.692
TMUB1
Transmembrane and ubiquitin-like domain-containing protein 1.
      
 0.682
ERLEC1
Endoplasmic reticulum lectin 1.
    
 
 0.669
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.