STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RXRARetinoic acid receptor RXR-alpha isoform X1. (550 aa)    
Predicted Functional Partners:
PPARG
Peroxisome proliferator-activated receptor gamma isoform X1.
    
0.963
PPARA
Peroxisome proliferator-activated receptor alpha.
   
0.953
RXRG
Retinoic acid receptor RXR-gamma isoform X1.
  
  
 
0.901
RXRB-2
Retinoic acid receptor RXR-beta.
     
  0.900
NR1H2
Oxysterols receptor LXR-beta.
   
0.786
NR1H3
Oxysterols receptor LXR-alpha isoform X1.
   
0.786
NR1H4
Bile acid receptor isoform X1.
   
0.775
MED1
Mediator of RNA polymerase II transcription subunit 1.
    
 0.747
LOC110072318
Bile acid receptor-like isoform X1.
   
0.739
PPARD
Peroxisome proliferator activated receptor delta.
    
0.705
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.