Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GATA5Transcription factor GATA-5. (372 aa)    
Predicted Functional Partners:
NKX2-5
Homeobox protein Nkx-2.5.
   
 0.952
ZFPM2
Zinc finger protein ZFPM2.
    
 0.918
FOXA1
Forkhead box A1.
   
 0.788
TBX20
T-box transcription factor TBX20.
   
 0.786
ZFPM1
Zinc finger protein, FOG family member 1.
   
 0.710
TAL1
T-cell acute lymphocytic leukemia protein 1 isoform X1.
   
 0.686
LMCD1
LIM and cysteine-rich domains protein 1 isoform X1.
    
 0.644
EP300
Histone acetyltransferase p300 isoform X1.
    
 0.630
FOXA3
Forkhead box protein A3, hepatocyte nuclear factor 3-gamma.
   
 0.601
HAND2
Heart- and neural crest derivatives-expressed protein 2.
   
 0.596
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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