STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA5Transcription factor GATA-5. (372 aa)    
Predicted Functional Partners:
NKX2-5
Homeobox protein Nkx-2.5.
   
 0.849
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
   
 0.803
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
   
 0.803
ZFPM2
Zinc finger protein ZFPM2.
    
 0.788
ZFPM1
Zinc finger protein, FOG family member 1.
   
 0.669
LMO2
LIM domain only 2.
    
 0.666
TAL1
T-cell acute lymphocytic leukemia protein 1 isoform X1.
   
 0.636
FOXA1
Forkhead box A1.
   
 0.634
LMCD1
LIM and cysteine-rich domains protein 1 isoform X1.
    
 0.624
EP300
Histone acetyltransferase p300 isoform X1.
    
 0.604
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.