Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EPDR1Mammalian ependymin-related protein 1. (120 aa)    
Predicted Functional Partners:
AOAH
Acyloxyacyl hydrolase isoform X1.
      
 0.748
TRMT9B
Probable tRNA methyltransferase 9-like protein isoform X1.
      
 0.694
GPR141
Probable G-protein coupled receptor 141.
      
 0.693
NHS
Nance-Horan syndrome protein and NHS-like proteins.
      
 0.689
EXOSC3
Exosome complex component RRP40.
      
 0.643
TMEM106B
Transmembrane protein 106B.
      
 0.643
CPD
Carboxypeptidase D.
      
 0.642
SQSTM1
Sequestosome-1 isoform X1.
    
 
 0.624
CUNH8orf48
Uncharacterized protein C8orf48 homolog isoform X1.
      
 0.619
JDP2
Jun dimerization protein 2 isoform X1.
      
 0.574
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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