Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF148Zinc finger protein 148 isoform X1. (796 aa)    
Predicted Functional Partners:
LOC110077941
Homeobox protein NANOG-like.
    
 0.772
ARHGAP15
Rho GTPase-activating protein 15 isoform X1.
      
 0.623
ATP2B4
Plasma membrane calcium-transporting ATPase 4 isoform X1.
    
 0.620
BTBD16
BTB/POZ domain-containing protein 16 isoform X1.
      
 0.572
CDK2AP1
Cyclin-dependent kinase 2-associated protein 1 isoform X1.
   
 
 0.514
EWSR1
RNA-binding protein EWS isoform X1.
   
 
 0.514
CDK2AP2
Cyclin dependent kinase 2 associated protein 2.
   
 
 0.514
LIN28B
Protein lin-28 homolog B isoform X1.
    
 
 0.483
MSH3
DNA mismatch repair protein MSH3.
      
 0.438
EP300
Histone acetyltransferase p300 isoform X1.
    
 0.436
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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