STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000006358annotation not available (360 aa)    
Predicted Functional Partners:
BRCC3
BRCA1/BRCA2-containing complex subunit 3.
    
 0.706
ABRAXAS1
BRCA1-A complex subunit Abraxas isoform X1.
    
 0.695
BABAM1
LOW QUALITY PROTEIN: BRISC and BRCA1-A complex member 1.
    
 0.684
BABAM2
BRCA1-A complex subunit BRE isoform X1.
    
 0.674
BARD1
BRCA1-associated RING domain protein 1.
    
 0.598
BRCA1
Breast cancer type 1 susceptibility protein.
    
 0.597
RPS27A
Ribosomal protein S27a.
    
  0.534
ENSPVIP00000005741
annotation not available
  
    0.500
ENSPVIP00000013703
annotation not available
  
     0.484
UBC
Polyubiquitin-C.
    
  0.472
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.