Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF182E3 ubiquitin-protein ligase RNF182. (246 aa)    
Predicted Functional Partners:
RNF150
RING finger protein 150.
      
 0.662
NRIP3
Nuclear receptor-interacting protein 3.
   
  
 0.624
TECTB
Tectorin beta.
      
 0.622
TBC1D30
TBC1 domain family member 30 isoform X1.
      
 0.602
GID4
Glucose-induced degradation protein 4 homolog.
      
 0.587
RNF121
RING finger protein 121/175.
      
 0.570
ENSPVIP00000023917
annotation not available
      
 0.566
RNF186
RING finger protein 186.
      
 0.566
LHFPL2
Lipoma HMGIC fusion partner-like 2 protein.
      
 0.520
RPS27A
Ribosomal protein S27a.
    
  0.514
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.