Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYLIPE3 ubiquitin-protein ligase MYLIP isoform X1. (445 aa)    
Predicted Functional Partners:
CNPY2
Protein canopy homolog 2 isoform X1.
    
 
 0.843
LDLR
Low-density lipoprotein receptor.
    
 0.840
VLDLR
Very low-density lipoprotein receptor isoform X1.
    
 0.840
LRP8
LDL receptor related protein 8.
    
 0.840
RPS27A
Ribosomal protein S27a.
    
 0.815
APAF1
Apoptotic protease-activating factor 1.
   
 0.704
XPR1
Xenotropic and polytropic retrovirus receptor 1.
    
 
 0.693
INCENP
Inner centromere protein isoform X1.
   
 0.650
LOC110088182
Uncharacterized protein KIAA2012-like.
     
 0.626
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
   0.622
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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