STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN1Ataxin-1 isoform X1. (807 aa)    
Predicted Functional Partners:
CIC
Protein capicua homolog isoform X1.
    
 
 0.961
RBPJ
Recombining binding protein suppressor of hairless isoform X1.
    
 0.920
IST1
Ataxin-1-like isoform X1.
    
0.914
RBPJL
Recombining binding protein suppressor of hairless-like protein.
    
 0.913
UBQLN4
Ubiquilin 4.
    
 
 0.699
LRRK2
Leucine-rich repeat serine/threonine-protein kinase 2 isoform X1.
      
 0.665
RBM17
Splicing factor 45 isoform X1.
    
 
 0.654
ATXN2
Ataxin-2 isoform X1.
   
 
 0.648
BBX
HMG box transcription factor BBX isoform X1.
    
 
 0.638
PQBP1
Polyglutamine-binding protein 1.
    
 
 0.630
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.