Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATXN1Ataxin-1 isoform X1. (807 aa)    
Predicted Functional Partners:
CIC
Protein capicua homolog isoform X1.
    
 
 0.970
IST1
Ataxin-1-like isoform X1.
    
0.920
RBPJ
Recombining binding protein suppressor of hairless isoform X1.
    
 0.920
RBPJL
Recombining binding protein suppressor of hairless-like protein.
    
 0.913
YWHAZ
14-3-3 protein beta/theta/zeta.
    
 
 0.901
ATXN2
Ataxin-2 isoform X1.
   
 
 0.745
RBM17
Splicing factor 45 isoform X1.
    
 
 0.726
COIL
Coilin isoform X1.
    
 
 0.712
BBX
HMG box transcription factor BBX isoform X1.
    
 
 0.690
ATXN3
Ataxin-3 isoform X1.
   
  
 0.653
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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