Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RCAN2Calcipressin-2 isoform X1. (219 aa)    
Predicted Functional Partners:
PPP3R1
Serine/threonine-protein phosphatase 2B regulatory subunit.
    
 
 0.788
PPP3CA
Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform isoform X1.
    
 
 0.608
PPP3CB
Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X1.
    
 
 0.608
PPP3CC
Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform isoform X1.
    
 
 0.608
TM2D1
TM2 domain-containing protein 1.
      
 0.570
CREG1
Protein CREG1.
      
 0.516
C2CD2
C2 domain-containing protein 2.
      
 0.496
TRDMT1
TRNA (cytosine(38)-C(5))-methyltransferase isoform X1.
      
 0.482
SPON1
Spondin-1.
      
 0.481
SERPINF1
Pigment epithelium-derived factor.
      
 0.478
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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