STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110081706Retinal dehydrogenase 1-like. (505 aa)    
Predicted Functional Partners:
CYP26A1
Cytochrome P450 family 26 subfamily A.
   
 0.946
CYP26B1
Cytochrome P450 family 26 subfamily B.
   
 0.944
DHRS3
Short-chain dehydrogenase/reductase 3.
  
 0.933
LOC110087810
Dehydrogenase/reductase SDR family member 4-like.
  
 0.925
LOC110082355
Retinol dehydrogenase 12-like isoform X1.
  
 0.925
LOC110082559
Retinol dehydrogenase 12-like isoform X1.
  
 0.925
LOC110089018
Aldehyde oxidase 2-like.
   
 
 0.917
LOC110083729
Cytochrome P450 3A24-like isoform X1.
   
 0.914
LOC110091550
Cytochrome P450 3A21-like.
   
 0.914
RDH5
11-cis retinol dehydrogenase.
     
 0.912
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.