STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110087303Eukaryotic translation initiation factor 2C. (794 aa)    
Predicted Functional Partners:
DICER1
Endoribonuclease Dicer.
   
 0.824
ENSPVIP00000001890
annotation not available
   
 0.757
AGO2
Eukaryotic translation initiation factor 2C.
   
 0.757
TARBP2
RISC-loading complex subunit TARBP2 isoform X1.
    
 0.708
PRKRA
Interferon-inducible double-stranded RNA-dependent protein kinase activator A isoform X1.
    
 0.708
POLR2A
DNA-directed RNA polymerase II subunit RPB1.
    
 0.632
DDX6
Probable ATP-dependent RNA helicase DDX6.
   
 
 0.616
TNRC6B
Trinucleotide repeat-containing gene 6B protein.
    
 0.615
TSNAX
Disrupted in schizophrenia 1 protein isoform X1.
    
 0.603
DROSHA
Ribonuclease III.
    
 0.596
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.