STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PUM2Pumilio RNA binding family member 2. (1081 aa)    
Predicted Functional Partners:
NANOS1
Nanos homolog 1.
   
 
 0.813
LOC110076961
Cytochrome c oxidase assembly protein subunit 17.
    
 
 0.801
ENSPVIP00000024404
annotation not available
   
 
 0.751
RANBP2
RanBP2-like and GRIP domain-containing protein 4 isoform X1.
   
   0.750
CLINT1
Clathrin interactor 1 isoform X1.
   
 
 0.746
LOC110079358
acyl-CoA-binding domain-containing protein 5-like.
   
   0.726
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.724
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial.
    
 
 0.720
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.719
CNOT8
CCR4-NOT transcription complex subunit 7/8.
    
 
 0.719
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.