Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RFX3Transcription factor RFX3 isoform X1. (748 aa)    
Predicted Functional Partners:
FOXJ1
Forkhead box protein J1.
    
 
 0.739
FOXJ2
Forkhead box protein J2 isoform X1.
    
 
 0.619
BTAF1
TATA-binding protein-associated factor 172.
    
   0.616
LOC110089104
Forkhead box protein J1-B-like.
    
 
 0.616
MYB
Transcriptional activator Myb isoform X1.
    
 
 0.588
NF1
Neurofibromin 1.
      
 0.573
RFXAP
Regulatory factor X associated protein.
    
 
 0.537
LOC110083527
LOW QUALITY PROTEIN: serine/threonine-protein kinase ATR-like.
    
 
 0.535
ENSPVIP00000000797
annotation not available
    
 
 0.535
CHEK2
Serine/threonine-protein kinase CHEK2.
   
 
 0.507
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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