STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATN3Matrilin-3. (521 aa)    
Predicted Functional Partners:
THBS4
Thrombospondin 2/3/4/5.
   
 0.620
COMP
Cartilage oligomeric matrix protein isoform X1.
   
 0.620
LUM
Lumican.
   
 0.592
CRELD2
Cysteine-rich with EGF-like domain protein 2.
    
 0.589
SLC26A2
Solute carrier family 26 (sulfate anion transporter), member 2.
      
 0.567
ACAN
Aggrecan core protein isoform X1.
   
 0.564
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
    
 0.519
ENSPVIP00000015452
annotation not available
   
 0.511
FRZB
Frizzled related protein.
    
 0.505
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
    
 0.502
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.