Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLSPNClaspin. (1184 aa)    
Predicted Functional Partners:
CHEK1
Serine/threonine-protein kinase CHEK1.
   
 0.996
TOPBP1
DNA topoisomerase 2-binding protein 1 isoform X1.
   
 0.987
CDC45
Cell division control protein 45 homolog.
   
 0.983
RPA1
Replication protein A 70 kDa DNA-binding subunit.
    
 0.974
CDC7
Cell division cycle 7-related protein kinase isoform X1.
   
 0.971
TIMELESS
Protein timeless homolog isoform X1.
   
 0.971
RPA3
Replication protein A 14 kDa subunit.
    
 0.970
BTRC
F-box/WD repeat-containing protein 1A isoform X1.
    
 
 0.956
WRN
Werner syndrome ATP-dependent helicase isoform X1.
   
 0.954
PRIMPOL
DNA-directed primase/polymerase protein isoform X1.
   
 
 0.952
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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