STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA6LSpermatogenesis associated 6-like protein. (357 aa)    
Predicted Functional Partners:
SNRPD1
Small nuclear ribonucleoprotein Sm D1.
    
 0.999
SNRPD2
Small nuclear ribonucleoprotein Sm D2 isoform X1.
    
 0.997
SMN1
Survival motor neuron protein.
    
 0.997
SNRPG
Small nuclear ribonucleoprotein G.
    
  0.993
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
    
 0.989
SNRPE
Small nuclear ribonucleoprotein E.
   
 0.985
SNRPF
Small nuclear ribonucleoprotein F.
    
  0.985
SNRPA1
U2 small nuclear ribonucleoprotein A.
   
 0.981
GEMIN4
Gem-associated protein 4 isoform X1.
    
 0.966
GEMIN7
Gem associated protein 7.
    
 0.966
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.