STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPATA6LSpermatogenesis associated 6-like protein. (357 aa)    
Predicted Functional Partners:
SMN1
Survival motor neuron protein.
    
 0.958
DDX20
Probable ATP-dependent RNA helicase DDX20.
   
 0.953
SNRPD1
Small nuclear ribonucleoprotein Sm D1.
    
 0.946
SNRPE
Small nuclear ribonucleoprotein E.
   
 0.946
SNRPD2
Small nuclear ribonucleoprotein Sm D2 isoform X1.
    
 0.944
SNRPF
Small nuclear ribonucleoprotein F.
    
  0.902
SNRPG
Small nuclear ribonucleoprotein G.
    
 0.894
SNRPA1
U2 small nuclear ribonucleoprotein A.
   
 0.885
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
    
 0.865
NCBP2
Nuclear cap-binding protein subunit 2.
   
 0.862
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.