STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM43RNA-binding protein 43 isoform X1. (394 aa)    
Predicted Functional Partners:
RNF144B
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF144B.
      
 0.568
IQSEC3
IQ motif and Sec7 domain ArfGEF 3.
      
 0.563
B2M
Beta-2-microglobulin.
    
 0.544
STN1
CST complex subunit STN1.
    
 0.544
RPA2
Replication protein A 32 kDa subunit.
    
 0.544
SASS6
Spindle assembly abnormal protein 6 homolog isoform X1.
    
 0.544
FAM117B
Protein FAM117B.
   
  
 0.541
KPNB1
Importin subunit beta-1.
    
   0.518
MACROH2A1
Core histone macro-H2A.1 isoform X1.
   
 0.428
MACROH2A2
Core histone macro-H2A.2.
   
 0.428
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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