Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBM43RNA-binding protein 43 isoform X1. (394 aa)    
Predicted Functional Partners:
PARP9
Poly [ADP-ribose] polymerase 9 isoform X1.
   
 
 0.782
DTX3L
E3 ubiquitin-protein ligase DTX3L isoform X1.
   
   0.775
IQSEC3
IQ motif and Sec7 domain ArfGEF 3.
      
 0.694
RNF144B
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF144B.
      
 0.674
EFCAB11
EF-hand calcium-binding domain-containing protein 11 isoform X1.
      
 0.563
PJA2
E3 ubiquitin-protein ligase Praja-2 isoform X1.
      
 0.479
ATP6V1H
V-type H+-transporting ATPase subunit H.
      
 0.463
YPEL5
Protein yippee-like 5.
      
 0.463
FAM117B
Protein FAM117B.
   
  
 0.432
SYBU
Syntabulin.
      
 0.423
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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