Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RCL1RNA 3'-terminal phosphate cyclase-like protein isoform X1. (468 aa)    
Predicted Functional Partners:
BMS1
Ribosome biogenesis protein BMS1 homolog.
   
 0.999
WDR43
U3 small nucleolar RNA-associated protein 5.
   
 0.993
PWP2
Periodic tryptophan protein 2 homolog.
   
 
 0.991
IMP4
U3 small nucleolar ribonucleoprotein protein IMP4.
   
 
 0.989
UTP18
U3 small nucleolar RNA-associated protein 18 homolog isoform X1.
   
 0.986
NOC4L
U3 small nucleolar RNA-associated protein 19.
   
 
 0.984
BYSL
Essential nuclear protein 1.
   
 
 0.984
UTP6
U3 small nucleolar RNA-associated protein 6 homolog isoform X1.
   
 
 0.983
UTP4
U3 small nucleolar RNA-associated protein 4 homolog.
   
 0.982
WDR3
U3 small nucleolar RNA-associated protein 12.
   
 
 0.979
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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