Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLGRKTPlasminogen receptor (KT) isoform X1. (205 aa)    
Predicted Functional Partners:
HPN
Serine protease hepsin isoform X1.
      
 0.628
ARL14EP
ARL14 effector protein.
   
  
 0.591
TGFBRAP1
Transforming growth factor beta receptor associated protein 1.
      
 0.565
TMPRSS4
Transmembrane serine protease 4.
      
 0.547
LOC110089353
Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like isoform X1.
      
 0.526
ASCC1
Activating signal cointegrator 1 complex subunit 1 isoform X1.
      
 0.482
PLG
Plasminogen.
    
 
 0.473
ENSPVIP00000011540
annotation not available
    
 
 0.473
CDCP1
CUB domain-containing protein 1 isoform X1.
      
 0.454
MFSD10
Major facilitator superfamily domain-containing protein 10 isoform X1.
   
  
 0.446
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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