Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MSGN1Mesogenin 1. (172 aa)    
Predicted Functional Partners:
TBX6
T-box transcription factor TBX6.
   
 0.721
LOC110081995
T-box-containing protein TBX6L-like.
   
 0.721
HES7
Hes family bHLH transcription factor 7.
   
 0.702
APIP
Methylthioribulose-1-phosphate dehydratase.
      
 0.609
PPP1R14B
Protein phosphatase 1 regulatory subunit 14B.
      
 0.609
SMC6
Structural maintenance of chromosomes protein 6 isoform X1.
      
 0.568
GEN1
Flap endonuclease GEN homolog 1.
      
 0.505
ATP11B
LOW QUALITY PROTEIN: probable phospholipid-transporting ATPase IF.
    
   0.494
PAICS
Phosphoribosylaminoimidazole carboxylase / phosphoribosylaminoimidazole-succinocarboxamide synthase.
      
 0.482
GADD45G
Growth arrest and DNA damage-inducible protein GADD45 gamma.
      
 0.481
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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