STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSNL1Visinin like 1. (191 aa)    
Predicted Functional Partners:
PI4KB
Phosphatidylinositol 4-kinase beta isoform X1.
    
 
 0.631
FAM131C
Family with sequence similarity 131 member C.
    
   0.617
CFAP299
Uncharacterized protein C4orf22 homolog.
    
 0.582
RBBP5
Retinoblastoma-binding protein 5 isoform X1.
      
 0.527
MAPT
Microtubule-associated protein tau-like isoform X1.
   
 
 0.523
MANF
Mesencephalic astrocyte-derived neurotrophic factor.
     
 0.517
WDR82
WD repeat-containing protein 82 isoform X1.
    
 
 0.509
LRGUK
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
 0.507
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.470
TMX4
Thioredoxin-related transmembrane protein 4.
   
 
 0.465
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.