Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
NDRG3Protein NDRG3 isoform X1. (387 aa)    
Predicted Functional Partners:
TMX2
Thioredoxin-related transmembrane protein 2.
   
   0.794
HDHD3
Haloacid dehalogenase-like hydrolase domain-containing protein 3.
    
 
 0.628
EDEM2
ER degradation-enhancing alpha-mannosidase-like protein 2.
      
 0.618
PHF20
PHD finger protein 20.
      
 0.612
TRPC4AP
Short transient receptor potential channel 4-associated protein isoform X1.
      
 0.595
MYCN
N-myc proto-oncogene protein.
    
 
 0.594
TEX261
Protein TEX261.
      
 0.592
CSTF1
Cleavage stimulation factor subunit 1 isoform X1.
    
   0.587
SLA2
Src-like-adapter 2 isoform X1.
     
 0.567
NMT2
Glycylpeptide N-tetradecanoyltransferase 2.
      
 0.565
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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