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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCA1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1. (1055 aa)    
Predicted Functional Partners:
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
    
 0.973
POLE3
DNA polymerase epsilon subunit 3.
    
 0.966
RBBP4
Histone-binding protein RBBP4 isoform X1.
   
 0.955
BPTF
Nucleosome-remodeling factor subunit BPTF.
   
 0.946
CECR2
Cat eye syndrome critical region protein 2.
    
 0.940
CHRAC1
Chromatin accessibility complex protein 1.
    
 0.927
BAZ1B
Bromodomain adjacent to zinc finger domain protein 1B.
   
 0.891
RSF1
Remodeling and spacing factor 1.
   
 0.881
LEO1
RNA polymerase-associated protein LEO1.
   
 0.844
BAZ2A
Bromodomain adjacent to zinc finger domain protein 2A isoform X1.
    
 0.746
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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