Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PNPLA8Calcium-independent phospholipase A2-gamma. (789 aa)    
Predicted Functional Partners:
ABHD5
1-acylglycerol-3-phosphate O-acyltransferase ABHD5.
      
 0.848
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.779
MED10
Mediator of RNA polymerase II transcription subunit 10.
   
 
 0.759
MED6
Mediator of RNA polymerase II transcription subunit 6.
   
 
 0.755
MED21
Mediator of RNA polymerase II transcription subunit 21.
    
 
 0.752
MED14
Mediator of RNA polymerase II transcription subunit 14.
    
 
 0.747
MED7
Mediator complex subunit 7.
   
 
 0.724
MED31
Mediator of RNA polymerase II transcription subunit 31.
    
 
 0.717
LOC110085431
Cytochrome c oxidase assembly factor 5-like.
      
 0.696
PNPLA6
Lysophospholipid hydrolase.
   
  
 0.656
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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