Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110074318Synaptotagmin-like protein 4. (984 aa)    
Predicted Functional Partners:
RAB27B
Ras-related protein Rab-27B.
   
 0.888
RAB27A
Ras-related protein Rab-27A.
   
 0.888
MLPH
Melanophilin.
     
 0.678
ENSPVIP00000004212
annotation not available
     
 0.595
ITSN2
Intersectin-2 isoform X1.
     
 0.531
TBC1D10B
TBC1 domain family member 10B.
     
  0.513
TBC1D10A
TBC1 domain family member 10A.
     
  0.513
RAB44
Ras-related protein Rab-44 isoform X1.
    
 
 0.487
LHFPL2
Lipoma HMGIC fusion partner-like 2 protein.
     
 0.483
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.455
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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