STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB39BRas-related protein Rab-39B. (213 aa)    
Predicted Functional Partners:
C9orf72
Guanine nucleotide exchange protein C9orf72.
    
 0.988
SMCR8
Smith-Magenis syndrome chromosomal region candidate gene 8 protein.
    
 0.962
WDR41
WD repeat-containing protein 41 isoform X1.
     
 0.954
SQSTM1
Sequestosome-1 isoform X1.
    
 0.932
RAB8A
Ras-related protein Rab-8A.
  
 
 
0.904
RAB42
Putative Ras-related protein Rab-42.
  
  
 
0.902
FAAP24
Fanconi anemia core complex-associated protein 24 isoform X1.
    
   0.779
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha.
    
 0.772
RAB3IP
Rab-3A-interacting protein isoform X1.
    
 0.746
GDI2
Rab GDP dissociation inhibitor beta isoform X1.
    
 0.712
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.