Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VBP1Prefoldin subunit 3. (226 aa)    
Predicted Functional Partners:
PFDN5
Prefoldin alpha subunit.
   
 0.997
PFDN1
Prefoldin subunit 1.
   
 0.995
PFDN2
Prefoldin subunit 2.
   
 0.994
PFDN4
Prefoldin subunit 4.
   
 0.994
LOC110071373
Prefoldin subunit 6-like.
   
 0.982
ENSPVIP00000004832
annotation not available
   
 0.982
CCT7
T-complex protein 1 subunit eta.
   
 0.890
VHL
Von Hippel-Lindau disease tumor suppressor.
    
 
 0.872
PDRG1
P53 and DNA damage-regulated protein 1.
    
 
 0.859
TCP1
T-complex protein 1 subunit alpha.
   
 0.856
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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