Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TUBB6Tubulin beta-6 chain isoform X1. (446 aa)    
Predicted Functional Partners:
GJA1
Gap junction alpha-1 protein.
     
  0.900
LOC110073375
Tubulin alpha-8 chain.
  
0.888
TUBA8
Tubulin alpha-8 chain isoform X1.
  
0.888
LOC110070395
Tubulin alpha-4 chain-like.
  
0.888
LOC110083393
Tubulin alpha-3 chain isoform X1.
  
0.888
LOC110073656
Tubulin alpha-1B chain.
  
0.888
LOC110078182
Tubulin alpha-4A chain.
  
0.888
LOC110078208
Tubulin alpha-1D chain.
  
0.888
LOC110070601
Tubulin alpha-3 chain-like.
  
0.870
TUBAL3
Tubulin alpha chain-like 3.
  
0.870
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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