STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFG3L2AFG3-like protein 2 isoform X1. (808 aa)    
Predicted Functional Partners:
NDUFA13
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13.
   
 
 0.966
SPG7
Paraplegin isoform X1.
  
 
0.956
TIMMDC1
Complex I assembly factor TIMMDC1, mitochondrial.
   
   0.948
PHB
Prohibitin 1.
   
 0.927
PHB2
Prohibitin-2 isoform X1.
   
 0.906
SMDT1
Essential MCU regulator, mitochondrial.
     
 0.857
PMPCA
Mitochondrial-processing peptidase subunit alpha.
  
 0.848
MRPL2
39S ribosomal protein L2, mitochondrial.
   
 
 0.842
YME1L1
ATP-dependent zinc metalloprotease YME1L1 isoform X1.
  
 
0.830
CLPX
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1.
  
  
 0.809
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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