STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM71Tripartite motif-containing protein 71. (720 aa)    
Predicted Functional Partners:
SMARCC1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.
    
 
 0.693
LOC110085344
Histone H2A.Z.
    
 0.652
LIN52
Protein lin-52 homolog.
      
 0.649
ENSPVIP00000001890
annotation not available
    
 0.504
AGO2
Eukaryotic translation initiation factor 2C.
    
 0.504
ZAR1
Zygote arrest 1.
      
 0.472
JAZF1
Juxtaposed with another zinc finger protein 1.
      
 0.471
BBOX1
Gamma-butyrobetaine dioxygenase.
      
 0.468
LIN28A
Protein lin-28 homolog A.
   
 
 0.456
CREB3L2
cAMP responsive element binding protein 3 like 2.
      
 0.451
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.