Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
TOPAZ1Testis- and ovary-specific PAZ domain-containing protein 1. (1931 aa)    
Predicted Functional Partners:
TUBGCP5
Tubulin gamma complex associated protein 5.
   
 0.730
TUBGCP4
Gamma-tubulin complex component 4 isoform X1.
    
 0.707
TCTE3
Tctex1 domain-containing protein 3 isoform X1.
      
 0.705
APBA1
Amyloid beta A4 precursor protein-binding family A member 1 isoform X1.
      
 0.681
NEDD1
Protein NEDD1.
    
 0.678
LOC110070317
LOW QUALITY PROTEIN: gamma-tubulin complex component 2-like.
   
 0.660
MTURN
Maturin.
      
 0.644
CEP126
Centrosomal protein of 126 kDa isoform X1.
    
 
 0.623
CWC25
Pre-mRNA-splicing factor CWC25 homolog isoform X1.
   
  
 0.616
U2AF2
Splicing factor U2AF 65 kDa subunit.
      
 0.616
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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