STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C9orf85Uncharacterized protein C9orf85 homolog. (169 aa)    
Predicted Functional Partners:
BABAM1
LOW QUALITY PROTEIN: BRISC and BRCA1-A complex member 1.
    
   0.855
BRCC3
BRCA1/BRCA2-containing complex subunit 3.
    
   0.850
BABAM2
BRCA1-A complex subunit BRE isoform X1.
    
   0.767
ZFAND5
AN1-type zinc finger protein 5 isoform X1.
      
 0.689
ABRAXAS2
BRISC complex subunit Abro1.
    
   0.616
RSRC2
Arginine/serine-rich coiled-coil protein 2 isoform X1.
      
 0.567
TMC1
Transmembrane channel like 1.
    
 
 0.500
TMC3
Transmembrane channel like 3.
    
 
 0.500
NOC4L
U3 small nucleolar RNA-associated protein 19.
      
 0.483
TMC2
Transmembrane channel-like protein 2 isoform X1.
    
 
 0.438
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.