Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMMECR1AMME syndrome candidate gene 1 protein. (199 aa)    
Predicted Functional Partners:
PGGT1B
Geranylgeranyl transferase type-1 subunit beta isoform X1.
    
   0.737
HMGB3
High mobility group protein B3.
   
  
 0.604
FNTA
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
    
   0.590
STK26
Serine/threonine-protein kinase 24/25/MST4.
   
  
 0.509
ACSL4
Long-chain-fatty-acid--CoA ligase 4 isoform X1.
   
  
 0.469
MEMO1
MEMO1 family protein.
  
    0.468
EDC3
Enhancer of mRNA-decapping protein 3.
   
  
 0.460
ALG13
Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13.
   
  
 0.457
TMEM164
Transmembrane protein 164.
   
  
 0.443
FAM199X
Protein FAM199X.
   
  
 0.441
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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