Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
NOD1Nucleotide-binding oligomerization domain-containing protein 1-like. (791 aa)    
Predicted Functional Partners:
LOC110085504
Receptor-interacting serine/threonine-protein kinase 2-like isoform X1.
   
 0.996
RIPK2
Receptor-interacting serine/threonine-protein kinase 2.
   
 0.996
ATG16L1
Autophagy-related protein 16-1 isoform X1.
    
 0.987
SUGT1
Suppressor of G2 allele of SKP1.
    
 0.977
AAMP
Angio-associated migratory cell protein.
     
 0.941
LOC110084638
T-cell surface glycoprotein CD4-like isoform X1.
    
 
 0.897
LOC110087544
E3 ubiquitin-protein ligase RNF31-like.
   
 
 0.866
TAB1
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1.
   
 0.852
MAP3K7
Mitogen-activated protein kinase kinase kinase 7 isoform X1.
    
 0.841
RAG1
V(D)J recombination-activating protein 1.
      
 0.824
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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