STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOD1Nucleotide-binding oligomerization domain-containing protein 1-like. (791 aa)    
Predicted Functional Partners:
RIPK2
Receptor-interacting serine/threonine-protein kinase 2.
   
 0.992
LOC110085504
Receptor-interacting serine/threonine-protein kinase 2-like isoform X1.
   
 0.988
ATG16L1
Autophagy-related protein 16-1 isoform X1.
    
 0.968
SUGT1
Suppressor of G2 allele of SKP1.
    
 0.952
RPS27A
Ribosomal protein S27a.
    
  0.729
AAMP
Angio-associated migratory cell protein.
     
 0.723
UBC
Polyubiquitin-C.
    
 0.693
CARD9
Caspase recruitment domain-containing protein 9.
   
 
 0.629
LOC110084638
T-cell surface glycoprotein CD4-like isoform X1.
   
  
 0.618
LOC110072527
Ubiquitin-large subunit ribosomal protein L40e.
   
  0.608
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.