Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCXNeuronal migration protein doublecortin isoform X1. (367 aa)    
Predicted Functional Partners:
DCLK1
Serine/threonine-protein kinase DCLK1 isoform X1.
   
 
 0.953
NES
Nestin.
      
 0.906
GFAP
Glial fibrillary acidic protein.
    
 
 0.843
PAFAH1B1
Platelet-activating factor acetylhydrolase IB subunit alpha.
    
 
 0.810
PCNA
Proliferating cell nuclear antigen isoform X1.
      
 0.800
PVALB
Parvalbumin alpha.
     
 0.751
MAP2
Microtubule-associated protein 2 isoform X1.
   
 
 0.726
CALB2
Calretinin.
     
 0.719
CDK5
Cyclin-dependent-like kinase 5.
    
 
 0.706
GPHN
Gephyrin.
      
 0.697
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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