STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC5Structural maintenance of chromosomes protein 5 isoform X1. (1079 aa)    
Predicted Functional Partners:
SMC6
Structural maintenance of chromosomes protein 6 isoform X1.
   
0.997
NSMCE2
E3 SUMO-protein ligase NSE2.
    
 0.996
NSMCE1
Non-structural maintenance of chromosomes element 1 homolog.
    
 0.994
NSMCE4A
Non-structural maintenance of chromosomes element 4 homolog A.
   
 0.994
LOC110078621
Non-structural maintenance of chromosomes element 3 homolog.
   
 0.988
SMC3
Structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6).
   
 0.897
STN1
CST complex subunit STN1.
   
 
 0.887
SUMO1
Small ubiquitin-related modifier 1.
   
 0.879
SLF1
SMC5-SMC6 complex localization factor protein 1 isoform X1.
   
 
 0.870
SUMO2
Small ubiquitin-related modifier 2.
   
 0.861
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.