Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRPC5Transient receptor potential cation channel subfamily C member 5. (986 aa)    
Predicted Functional Partners:
TRPC1
Transient receptor potential cation channel subfamily C member 1.
    
 0.788
TRPA1
Transient receptor potential cation channel subfamily A member 1.
   
 
 0.726
STIM1
Stromal interaction molecule 1 isoform X1.
    
 0.642
TRPV2
Transient receptor potential cation channel subfamily V member 2.
     
 0.629
TRPV3
Transient receptor potential cation channel subfamily V member 3.
     
 0.607
STIM2
Stromal interaction molecule 2.
    
 0.601
ANK3
Ankyrin-3.
     
 0.591
ANK1
Ankyrin-1 isoform X1.
     
 0.591
LOC110083900
Ankyrin-2-like.
     
 0.591
DBH
Dopamine beta-monooxygenase.
      
 0.567
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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