STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATOH1Atonal bHLH transcription factor 1. (382 aa)    
Predicted Functional Partners:
ASCL1
Achaete-scute complex protein.
   
 
 0.715
ENSPVIP00000007234
annotation not available
    
 
 0.710
TCF4
Transcription factor 4 isoform X1.
    
 
 0.710
TCF3
Transcription factor 3.
    
 
 0.710
TCF12
Transcription factor 12 isoform X1.
    
 
 0.710
HES1
Transcription factor HES-1 isoform X1.
    
 
 0.490
LOC110083392
Hairy and enhancer of split 2/6/7.
    
 
 0.490
HES4
Transcription factor HES-4 isoform X1.
    
 
 0.490
DBX1
Developing brain homeobox 1.
      
 0.482
PTF1A
Pancreas transcription factor 1 subunit alpha.
    
 
 0.456
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.