Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCZ1Vacuolar fusion protein CCZ1 homolog. (603 aa)    
Predicted Functional Partners:
RAB7A
Ras-related protein Rab-7A.
    
 0.994
MON1B
Vacuolar fusion protein MON1 homolog B-like isoform X1.
    
 0.984
MON1A
Vacuolar fusion protein MON1 homolog A.
    
 0.984
RAB7B
Ras-related protein Rab-7B.
    
 0.963
RMC1
Uncharacterized protein C18orf8 homolog.
    
 
 0.941
VPS39
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39.
    
 
 0.939
VPS11
Vacuolar protein sorting-associated protein 11 homolog isoform X1.
   
 
 0.938
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
    
 
 0.936
VPS41
Vacuolar protein sorting-associated protein 41 homolog isoform X1.
    
 
 0.912
GRIPAP1
GRIP1-associated protein 1 isoform X1.
    
 0.910
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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