Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000006843annotation not available (122 aa)    
Predicted Functional Partners:
PDLIM5
LIM domain-binding protein 3.
 
  
   0.758
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.478
ENSPVIP00000006841
annotation not available
 
  
   0.453
IFT88
Intraflagellar transport protein 88 homolog isoform X1.
    
 0.438
IFT57
Intraflagellar transport protein 57 homolog isoform X1.
    
 0.433
IFT172
Intraflagellar transport protein 172 homolog.
    
 0.425
TRAF3IP1
TRAF3-interacting protein 1.
    
 0.413
IFT80
Intraflagellar transport protein 80 homolog isoform X1.
    
 0.410
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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