STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX4Homeobox protein CDX-4 isoform X1. (277 aa)    
Predicted Functional Partners:
SPATA18
Mitochondria-eating protein isoform X1.
      
 0.679
CATSPER2
Cation channel sperm-associated protein 2.
      
 0.679
SPATA22
Spermatogenesis associated 22.
      
 0.679
BTBD16
BTB/POZ domain-containing protein 16 isoform X1.
      
 0.679
TRAPPC5
Trafficking protein particle complex subunit 5.
      
 0.523
PEX11G
Peroxisomal membrane protein 11C.
      
 0.523
B3GLCT
UDP-glucose:O-linked fucose beta-1,3-glucosyltransferase.
      
 0.523
MEDAG
Mesenteric estrogen-dependent adipogenesis protein.
      
 0.518
SLC7A3
Solute carrier family 7 (cationic amino acid transporter), member 3.
   
  
 0.492
FGF4
Fibroblast growth factor 4.
    
 
 0.491
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.