Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CDX4Homeobox protein CDX-4 isoform X1. (277 aa)    
Predicted Functional Partners:
SPATA22
Spermatogenesis associated 22.
      
 0.695
KDSR
3-ketodihydrosphingosine reductase isoform X1.
      
 0.637
BTBD16
BTB/POZ domain-containing protein 16 isoform X1.
      
 0.620
TRAPPC5
Trafficking protein particle complex subunit 5.
      
 0.609
PEX11G
Peroxisomal membrane protein 11C.
      
 0.609
B3GLCT
UDP-glucose:O-linked fucose beta-1,3-glucosyltransferase.
      
 0.609
MEDAG
Mesenteric estrogen-dependent adipogenesis protein.
      
 0.609
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
   
 
 0.592
OGG1
8-oxoguanine DNA glycosylase.
      
 0.588
FGF4
Fibroblast growth factor 4.
    
 
 0.581
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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